Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTRVVLSVGSNLGDRLARLRSVADGL----GDALIAASPIYEADPWGGVEQGQFLNAVLIADDPTCEPREWLRRAQEFERAAGRVRGQRWGPRNLDVDLIACYQTSATEALVEVTARENHLTLPHPLAHLRAFVLIPW--IA---VDPTAQLTVAGCPRPVTRLLAELEPADRDSVRLFRPSFDLNSRHPVSRAPES
3QBC Chain:B ((4-147))
MIQAYLGLGSNIGDRESQLNDAIKILNEYDGISVSNISPIYETAPVGYTEQPNFLN-LCVEIQTTLTVLQLLECCLKTEECLHRIRKERWGPRTLDVDILL-----YGEEMIDLPK----LSVPHPRMNERAFVLIPLNDIAANVVEPRSKLKV-------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3QBC.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -74823 for 1012 contacts (-73.9/contact) +
2D Compatibility (PS) -14173 + (NN) -3639 + (LL) 2604
1D Compatibility (HY) -12400 + (ID) 2750
Total energy: -105181.0 ( -103.93 by residue)
QMean score : 0.397
(partial model without unconserved sides chains):
PDB file :
Tito_3QBC.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3QBC-query.scw
PDB file :
Tito_Scwrl_3QBC.pdb
: