Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIVGVLVAAATPIISSASATPANIAGMVVFIDPGHNGANDASIGRQVPTGRGGTKNCQASGTSTNSGYPEHTFTWETGLRLRAALNALGVRTALSRGNDNALGPCVDERANMANALRPNAIVSLHADGGPASGRGFHVNYSAPPLNAIQAGPSVQFARIMRDQLQASGIPKANYIGQDGLYGRSDLAGLNLAQYPSILVELGNMKNPADSALMESAEGRQKYANALVRGVAGFLATQGQAR
4M6G Chain:A ((8-221))
-----------------------IAGMVVFIDPGHNGANDASIGRQVPTGRGGTKNCQASGTSTNSGYPEHTFTWETGLRLRAALNALGVRTALSRGNDNALGPCVDERANMANALRPNAIVSLHADGGPASGRGFHVNYSAPPLNAIQAGPSVQFARIMRDQLQASGIPKANYIGQDGLYGRSDLAGLNLAQYPSILVELGNMKNPADSALMESAEGRQKYANALVRGVAGFLATQ----
General information:
TITO was launched using:
RESULT:
Template:
4M6G.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -63583 for 1903 contacts (-33.4/contact) +
2D Compatibility (PS) -24018 + (NN) -17223 + (LL) 2116
1D Compatibility (HY) -23200 + (ID) 10700
Total energy: -136608.0 ( -71.79 by residue)
QMean score : 0.557
(partial model without unconserved sides chains):
PDB file :
Tito_4M6G.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4M6G-query.scw
PDB file :
Tito_Scwrl_4M6G.pdb
: