Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKGRSALLRALWIAALSFGLGGVAVAAEPTAKAAPYENLMVPSPSMGRDIPVAFLAGGPHAVYLLDAFNAGPDVSNWVTAGNAMNTLAGKGISVVAPAGGAYSMYTNWEQD-------GSKQWDTFLSAELPDWLAANRGLAPGGHAAVGAAQGGYGAMALAAFHPDRFGFAGSMSGFLYPSNTTTNGAIAAGMQQFGGVDTNGMWGAPQLGRWKWHDPWVHASLLAQNNTRVWVWSPTNPGASDPAAM----I-G--QAAEAMGNSRMFYNQYRSVGGH-NGHFDFPASGDNGWGSWAPQLGAMSGDIVGAIR |
4MQL Chain:A ((7-282)) | --------------------------------GLPVEYLQVPSASMGRDIKVQFQGGGPHAVYLLDGLRAQDDYNGWDINTPAFEEYYQSGLSVIMPVGGQSSFYTDWYQPSQSNGQNYTYKWETFLTREMPAWLQANKGVSPTGNAAVGLSMSGGSALILAAYYPQQFPYAASLSGFLNPSEGWWPTLIGLAMNDSGGYNANSMWGPSSDPAWKRNDPMVQIPRLVANNTRIWVYSGNG----TPSDLGGDNIPAKFLEGLTLRTNQTFRDTYAADG-GRNGVFNFPPNGTHSWPYWNEQLVAMKADIQHVL- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4MQL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -133076 for 2357 contacts (-56.5/contact) +
2D Compatibility (PS) -28492 + (NN) -15131 + (LL) 2448
1D Compatibility (HY) -20000 + (ID) 5550
Total energy: -199801.0 ( -84.77 by residue)
QMean score : 0.450
|
|
|