Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSTTFAARLNRLFDTVYPPGRGPHTSAEVIAALKAEGITMSAPYLSQLRSGNRTNPSGATMAALANFFRIKAAYFTDDEYYEKLDKELQWLCTMRDDGVRRIAQRAHGLPSAAQQKVLDRIDELRRAEGIDA
3QF3 Chain:C ((3-131))
-STTFAARLNRLFDTVYPPGRGPHTSAEVIAALKAEGITMSAPYLSQLRSGNRTNPSGATMAALANFFRIKAAYFTDDEYYEKLDKELQWLCTMRDDGVRRIAQRAHGLPSAAQQKVLDRIDELRRAEGI--
General information:
TITO was launched using:
RESULT:
Template:
3QF3.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -55863 for 772 contacts (-72.4/contact) +
2D Compatibility (PS) -14870 + (NN) -13248 + (LL) 276
1D Compatibility (HY) -14800 + (ID) 6450
Total energy: -104955.0 ( -135.95 by residue)
QMean score : 0.718
(partial model without unconserved sides chains):
PDB file :
Tito_3QF3.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3QF3-query.scw
PDB file :
Tito_Scwrl_3QF3.pdb
: