Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSAPAVAAGPTAAGATAARPATTRVTILTGRRMTDLVLPAAVPMETYIDDTVAVLSEVLEDTPADVLGGFDFTAQGVWAFARPGSPPLKLDQSLDDAGVVDGSLLTLVSVSRTERYRPLVEDVIDAIAVLDESPEFDRTALNRFVGAAIPLLTAPVIGMAMRAWWETGRSLWWPLAIGILGIAVLVGSFVANRFYQS-GHLAECLLVTTYLLIATAAALAVPLPRGVNSLGAPQVAGAATAVLFLTLMTRGGPRKRHELASFAVITAIAVIAAAAAFGYGYQDWVPAGGIAFGLFIVTNAAKLTVAVARIALPPIPVPGETVDNEELLDPVATPEATSEETPTWQAIIASVPASAVRLTER--SKLAKQLLIGYVTSGTLILAA---GAIAVVVRGHFFVHSLVVA---GLITTVCGFRSRLYAERWCAWALLAATVAIPTGLTAKLIIWYPHYAWLLLSVYLTVALVALVVVGSMAHVRRVSPVVKRTLELIDGAMIAAIIPMLLWITGVYDTVRNIRF--- |
| 4QLA Chain:A ((19-442)) | LDLEEWWGPPELKQKQDTSIKPFEIT--------------------FSETMVKELKERIKKR-------------------RPFAPPL------EGVGF---------------KYGFNSKQLDSWLKYWAE--EYPFAERQKFLNQY-PHFKTNIQGLNIHFMRITPKVPKGVEIVPLLLLHGWPGS--VREFYEAIPHLTAVSKDRNFALEIIAPSL--PGYGFSDAAVRPGLAAAEVAVIFKNLMARLGYKQ------YYVQGGDWGALIGSAMATFFPKEIIGFHSNMALTLSPAATFLEFVGAL--FPSLIVEPEL---ANRLYPLSEKYSTLLEELGYMHIQATKPDTVGIGLTDSPAGLLAYILEKFSTWTNPDLRSKEDGGLSYRWTKDQLIDNLMLYWSTKSIVTSMRLYAESFSSRHFDLKLDEIQVQVP--------------TWVLQAKHELAYQPPCILKMKY-------PKLVNASVIEDGGHFLAFELPEIFAKDVLKAIGEFRKLKN |
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General information:
TITO was launched using:
| RESULT:
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Template: 4QLA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -408263 for 3392 contacts (-120.4/contact) +
2D Compatibility (PS) -42508 + (NN) -9385 + (LL) 7824
1D Compatibility (HY) -11200 + (ID) 3750
Total energy: -467282.0 ( -137.76 by residue)
QMean score : 0.299
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