Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ----MSLTRVSVTAVRNLHPVTLSPSPRINILYGDNGSGKTSVLEAIHLLGLARSFR--------------------SARLQPVIQYEEAACTVFGQVMLANGIASNLGISRERQGEF-TIRIDGQNARSAAQLA------------ETLPLQLINPDSFRLLEGAPKIRRQFLDWGVFHVEPRFLPVWQRLQKALRQRNSWLRHGKLDPASQ--AAWDRELSLASDEIDAYRRSYIQALKPVFEETLAELVSLDDL-----------TLSYYRGWDKDRDLLEVLA-----SSLLRDQQMGHTQAGPQRADLRIRLAGH-----------NAAEILSRGQQKLVVCALRIAQGHLINRAKRGQC----VYLVDDLPSELDEQHRMALCRLLEDLGCQVFITCVDPQLLKDGWRTDTPVSMFHVEHGKVSQTTTIGSEA-- |
| 3EUJ Chain:A ((3-483)) | MIARGKFRSLTLINWNGFFARTFDFDELVTTLSGGNGAGKSTTMAGFVTALIPDLTLLNFRNTTEAGSTSSSRDKGLYGKLKAGVCYAVLETVNSRAQRIITGVRLQQIAGRDKKVDIRPFSLQNVPMTDSVISLFTEQVANKARVLSLNDLKEKFEETAVTFKPYHSITDYHSFMFDLGILPKRLRSSSDRNKFYKLIEASLYGGISSVITKSLRDYLLPENSGVRQAFQDAESVANILRKTIQREQNRILQLNQGLQNIAFGQVKGVRLVVNIRDTHSILLNALSDQSFSEALAMLYKRIGEELLDYRNYLDLEVETLRGAYGWMRAESSALSTGEAIGTGMSILLMVVQSWEEESRRMRAKDILPCRLLFLDQAARLDAMSINTLFELCERLDMQLLIAAPENISPERG----TTYKLVRKILANQEYVHVVGLKGFG |
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General information:
TITO was launched using:
| RESULT:
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Template: 3EUJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -107107 for 2772 contacts (-38.6/contact) +
2D Compatibility (PS) -39526 + (NN) -22535 + (LL) 232
1D Compatibility (HY) -2800 + (ID) 2200
Total energy: -173936.0 ( -62.75 by residue)
QMean score : 0.300
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