Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDNQRQYPRTPLKCRIRISHPLFGELMAQTRD-LSDTGVYVKHPDLTQLPTGSVVTGQVQDLPIDAPILQMEVVRVDAEGVGLRFLSEA
1XC0 Chain:A ((1-33))
-------GFFALIPKI-ISSPLFKTLLSAVGSALSSSGGQE------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1XC0.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -6140 for 143 contacts (-42.9/contact) +
2D Compatibility (PS) -3371 + (NN) -2051 + (LL) 3812
1D Compatibility (HY) -1600 + (ID) 550
Total energy: -9900.0 ( -69.23 by residue)
QMean score : 0.226
(partial model without unconserved sides chains):
PDB file :
Tito_1XC0.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1XC0-query.scw
PDB file :
Tito_Scwrl_1XC0.pdb
: