Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKTFARLAAGLCICAIASQANAWSQPTHKNIVKDALAFMNSSYATEEMRQAYRFYVSAAGSEAQAGEILGQAAFDVDDFKDTRLGGWWVGYEHAPLWGAASGIVNYTSYWHFLNLARDGDSHGNPHGGYDYRYHKVDGGIADVDWYAMVYLYNRELKREDFDTTEAHYRQGTRSDWQEHYGDFQTAAFQPIDNLATYWFEQFRAAPSLQTIGYALHATGDVAQPHHVWITSANGHSSWEGWVDDHYASEK-LNDPAAVANLVG-RYDPSKSIRDLLTQTGQVAYARP-EPLYD----TSYETRLRVAKELIPESI-ALTVTVLTKGANSFDAPTAL |
| 1VM0 Chain:A ((19-116)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KKNRIQVSNTKKPLFFYVN--LAKRYMQQYNDVELSALGMAIATVVTVTEILKNNGFAVEKKIMTSIVDIKPVQKAKIEITLVKSEKFDELMAAA----------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1VM0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -11573 for 550 contacts (-21.0/contact) +
2D Compatibility (PS) -8567 + (NN) 3957 + (LL) 14876
1D Compatibility (HY) -1600 + (ID) 500
Total energy: -3407.0 ( -6.19 by residue)
QMean score : 0.114
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