Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRPLTRLVPLALLLLAGCAGPLPQPDPQMAWVELRSAPANTLLAERLDGERLSDGRYFQVTPGRHVLEVRFQYELYGGSGGGGGGFGEPVQINCYQQVVYDGFEAGRRYRLEVRPQLRRALALLSDERGEVVARSNFQTSRCPPY
1OF5 Chain:B ((14-178))
-----NQAQITATFTKKILAHLDDPDSNLAQFVQLFNPNCRIIF---NATPFAQATVFLQMWQNQVVQTQHALTGVDYHAIPGSG---TLICNVNCKVRFD-----WGPYFGISLQLIIDDRIFRNDFNGVISGFNYNMVYKPE-
General information:
TITO was launched using:
RESULT:
Template:
1OF5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -34007 for 878 contacts (-38.7/contact) +
2D Compatibility (PS) -13585 + (NN) -5890 + (LL) 968
1D Compatibility (HY) -4800 + (ID) 850
Total energy: -58164.0 ( -66.25 by residue)
QMean score : 0.073
(partial model without unconserved sides chains):
PDB file :
Tito_1OF5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1OF5-query.scw
PDB file :
Tito_Scwrl_1OF5.pdb
: