Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MVPNSVSYYRSASYSHVGMVRKVNEDASLDAPEAGLWVVADGMGGHAAGDFVSSLIVDTLRRIPAASSLPAYVGALRTGLAQVNERVRQEAGLRGVSVMGSTLVLLAARG---NQASCLWAGDSRLYRLRGGVLEAISRDHSYVQELLDNALISEEEARHHPRANVVTRAVGVHEQLELSEAALHVLPGDSFLLCSDGLNKTADDSELRDVLSHSDPYAVVRSLVHLGLTRGAPDNITALVVRAF |
| 2JFR Chain:A ((2-233)) | ----MASVLSAATATDQGPVRENNQDACLAD--GILYAVADGFGA--RGHHASATALKTLSAGFAAAPD---RDGLLEAVQQANLRVFELLGD-EPTVSGTTLTAVAVFEPGQGGPLVVNIGDSPLYRIRDGHMEQLTDDHSVAGELVRMGEITRHEARWHPQRHLLTRALGIGPHIGPDVFGIDCGPGDRLLISSDGLFAAADEALIVDAATSPDPQVAVRRLVEVANDAGGSDNTTVVVIDLG |
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General information:
TITO was launched using:
| RESULT:
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Template: 2JFR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -148910 for 2108 contacts (-70.6/contact) +
2D Compatibility (PS) -23978 + (NN) -4514 + (LL) 528
1D Compatibility (HY) -5600 + (ID) 3900
Total energy: -186374.0 ( -88.41 by residue)
QMean score : 0.477
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