Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAVDMFIKIGDVKGESKDKTHAEEIDVLAWSWGMSQSGSMHMG-GGGGAGKVNVQDLSFTKYIDKSTPNLMMACSSGKHYPQAKLTIRKAGGENQVEYLIITLKEVLVSSVSTGGS-GGEDRLTENVTLNFAQVQVDYQPQKADGAKDGGPV-KYGWNIRQNVQA |
| 3EAA Chain:A ((2-162)) | -AFDTYIKLDKVDGESTDDKHKKWIEVLGFAWGAGNECTMESGTQGLNTGKAMMSVLRVTKWMDCASVKLASAAVQGQNFPTLELEICTQAGD-KFAFCIYKFTHVAVSSYQCSGATGGSDRPQETIDFAYKEVTWEYVPQDQNGKA-GGKIGPEGWSLITNKKK |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3EAA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) 31730 for 1022 contacts (31.0/contact) +
2D Compatibility (PS) -16276 + (NN) -1345 + (LL) 52
1D Compatibility (HY) 3200 + (ID) 1300
Total energy: 16061.0 ( 15.72 by residue)
QMean score : -0.028
|
|
|