Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSQALSIVASGMVSAVGLSAPASCAAIRCALDNFQETRFIDQGGEW-LLAASVPL--------EQPWRGRAKLLKMAARAIDEALRGQPDLDC----TELPLLLCVAEGDRPG--------------------RCAGLDESFLRDLEGELGRRFHPSSALIARGRVGGAVALLNARKLI-QGGCRQVLVAGVDSFVSGPTLAAYEARERLL-----------TSQNSNGFIPGEGAAAVLVAAPLH-EE---A-PQLLCIGLGFGVEKATVESEDLPLRADGLSQAVRAALAEAGCGLEQMDYRLTDISGEQYYFKEASLTLSRNLRVLKPKFDLWHPADCIGECGAAIGPALLAVALAASRKGYG-------------------------DGPNVFCHLGNDAGERAAALLSYRRVRAA |
| 1TQY Chain:B ((10-411)) | ---SVLITGVGVVAPNGLGLAPYWSAVLDGRHGLGPVTRFDVSRYPATLAGQIDDFHAPDHIPGRLLPQTDPSTRLALTAADWALQDAKADPESLTDYDMGVVTANACGGFDFTHREFRKLWSEGPKSVSVYESFAWFYAVNTGQISIRHGMR--GPSSALVAEQAGGLDALGHARRTIRRGT-PLVVSGGVDSALDPWGWVSQIASGRISTATDPDRAYLPFDERAAGYVPGEGGAILVLEDSAAAEARGRHDAYGELAGCASTFDPAPG-----SGRPAGLERAIRLALNDAGTGPEDVDVVFADGAGVPELDAAEARAIGRVFGRE--GVPVTVPKTTTGRLYSGGGPLDVVTALMSLREGVIAPTAGVTSVPREYGIDLVLGEPRSTAPRTALVLARGRWGFNSAAVLRRF----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1TQY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -182784 for 3099 contacts (-59.0/contact) +
2D Compatibility (PS) -34583 + (NN) -9643 + (LL) 1416
1D Compatibility (HY) -1600 + (ID) 3550
Total energy: -230744.0 ( -74.46 by residue)
QMean score : 0.440
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