Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSDAKVDTRRLVGRLLLVTVLMFAFGFALVPLYDVMCRALGINGKTAGSAYSGEQQVDVGREVKVQFMTSNNIDMVWEFRSAGDQLVVHPGAVNQMVFYARNPSDKPMTA--QAIPSIAPAEAAAYFHKTECFCFTQQVLQPGESIEMPVRFIVDRDLPKDVRHVTLAYTLFDITARKPPVPVAGR |
2KUT Chain:A ((11-73)) | --------------------------------------------------------------------------------------TPFEGEEITVSARVTNRGAAEAHNVPVAVYLGNPAQGGVEIGRDTI-----SRIPVGGTGLARVQWKATRKLAGRAANPGVPVYAVVDPDNRVAESDKAN |
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General information:
TITO was launched using:
| RESULT:
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Template: 2KUT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -15761 for 285 contacts (-55.3/contact) +
2D Compatibility (PS) -6324 + (NN) -64 + (LL) 7140
1D Compatibility (HY) 2800 + (ID) 350
Total energy: -12559.0 ( -44.07 by residue)
QMean score : 0.124
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