Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
----------------------MSLKWTRKAAADLDAIYDHYVVLIGPEKALKAVQDIVEQVKPLQQVANQ----GAGRPSEVPGVRTLTLERWP-FSAPFRVKGKEIQILRIDRVEITP
3UUN Chain:A ((338-453))
EVNLDRYQTALEEVLSWLLSAEDTLQAQGEISNDVEVVKDQFHTHEGYMMDLTAHQGRVGNILQLGSKLIGTGKLSEDEETEVQEQMNLLNSRWECLRVASMEKQSNLHRVLMDLQ----
General information:
TITO was launched using:
RESULT:
Template:
3UUN.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -6697 for 489 contacts (-13.7/contact) +
2D Compatibility (PS) -9238 + (NN) 136 + (LL) 220
1D Compatibility (HY) 400 + (ID) 800
Total energy: -15979.0 ( -32.68 by residue)
QMean score : 0.285
(partial model without unconserved sides chains):
PDB file :
Tito_3UUN.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3UUN-query.scw
PDB file :
Tito_Scwrl_3UUN.pdb
: