Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDRLPIIDIAPLYGADRGAWNDVARRIDQACREWGFFYIAGHPLPAARFEALLAAAREFF-ALPVEEKLKIDITR------SRNHRGYGAIATEQLDPALPSDFKETFDMALHLPAE-HPDVRAGKSFYGPNRHPD---LPGWEALLEGHYADMLALARTVLRALAIALGIEEDFFDRRFEQ--PVSVFRLIHYPPASARQ--------SADQPGAGAHTDYGCVTLLYQDAAGGLQVQNRQGEWIDAPPIDGTFVVNIGDMMARWSNDRYRSTPHRVISPRGVHRYSMPFFAEPHMDTEIRCLPGCFDADNPPKYPPTTCGDWLTSRFAQTYAYRRGETA |
| 1ODM Chain:A ((7-329)) | -ANVPKIDVSPLFGDDQAAKMRVAQQIDAASRDTGFFYAVNHGINV---QRLSQKTKEFHMSITPEEKWDLAIRAYNKEHQDQVRAGYYLSI-------PGKKAVESFCYLNPNFTPDHPRIQAKTPTHEVNVWPDETKHPGFQDFAEQYYWDVFGLSSALLKGYALALGKEENFFARHFKPDDTLASVVLIRYPYLDPYPEAAIKTAADGTKLSFEWHEDVSLITVLYQSNVQNLQVETA-AGYQDIEADDTGYLINCGSYMAHLTNNYYKAPIHRVKWV-NAERQSLPFFVNLGYDSVIDPFDPREP-NGKSDREPLSYGDYLQNGLVSLINKNGQT-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1ODM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -179345 for 2441 contacts (-73.5/contact) +
2D Compatibility (PS) -33446 + (NN) -26099 + (LL) 1260
1D Compatibility (HY) -16000 + (ID) 4400
Total energy: -258030.0 ( -105.71 by residue)
QMean score : 0.524
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