Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMFGSNDDKKAPQGGEKKGLFGWWRKKPQAGEQPADQPVEPVSETAAAEQRAPADDVAQSLTEQPGRQQPSAAEPAEPPAPVAEAPLAGDEPASAEEHSPRPEAPVAQPEPILAAEPEPEPEPEPEPEPEPVAPLAAAPAVSEPATRPGFFARLRQGLSKTSASIGEGMASLFLGRKEIDDDLLDDIETRLLTADVGVEATTLIVQNLTKRVARKELADSGALYKALQEELASLLRPVEQPLQVD----VAREPYVILVVGVNGVGKTTTIGKLAKKLQLEGKKVMLAAGDTFRAAAVEQLQVWGERNRIPVIAQHTGADSASVIFDAVQAAKARGIDVLIADTAGRLHTKDNLMEELKKVRRVIGKLDETAPHEVLLVLDAGTGQNAINQAKQFNLAVELTGLALTKLDGTAKGGVIFALAKQFGLPIRYIGVGEGIDDLRTFEADAFVQALFAERENA
2Q9B Chain:B ((2-302))---------------------------------------------------------------------------------------------------------------------------------------------------GFFDRLKAGLAKTRERL---LKAIPWGGNLEEVLEELEMALL--AADVGLSATEEILQEV-RASG---LKE------AVKEKLVGMLEPD-------KPKPVEPKGRVVLVVGVNGVGKTTTIAKLGRYYQNLGKKVMFCAGDTFRAAGGTQLSEWGKRLSIPVIQGPEGTDPAALAYDAVQAMKARGYDLLFVDTAGRLHTKHNLMEELKKVKRAIAKADPEEPKEVWLVLDAVTGQNGLEQAKKFHEAVGLTGVIVTKLDGTAKGGVLIPIVRTLKVPIKFVGVGEGPDDLQPFDPEAFVEALLED----


General information:
TITO was launched using:
RESULT:

Template: 2Q9B.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		3D Compatibility (PKB) -168998 for 2363 contacts (-71.5/contact) +
2D Compatibility (PS) -30682 + (NN) -16205 + (LL) 7128
1D Compatibility (HY) -25600 + (ID) 7450
Total energy: -241807.0 ( -102.33 by residue)
QMean score : 0.586

(partial model without unconserved sides chains):
PDB file : Tito_2Q9B.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2Q9B-query.scw
PDB file : Tito_Scwrl_2Q9B.pdb: