Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MMSPNGSLKFASQAVAKPYFVFALILFVGQILFGLIMGLQYVVGDFL----------------------------FPAIPFNVARMVH-TNLLIVWLLFGFM-GAAYYLVPEES-DCELYSPKLAWILFWVFAAAGVLTILGYLL-------------VPYAGLARLTGNELWPTMGREFLEQPTISKAGIVIVALGFLFNVGMTVLRGR-------KTAISMVLMTGLIGLALLFLFSFYN--------------------PENLTRDKFYWWWVVHLWVEGVWELIMGAILAFVLVKITGVDREVIEKWLYVIIAMALISGIIGTGHHYFWIGVPGYWLWLGSVFSALEPLPFFAMVLFAFNTINRRRRRDYPNRAVALWAMGTTVMAFLGAGVWGFMHTLAPVNYYTHGTQLTAAHGHMAFYGAYAMIVMTIISYAMPRLRGIGEAMDNRSQVLEMWGFWLMTVAMVFITLFLSAAGVLQVWLQRMPADGAAMTFMATQDQLAIFYWLREGAGVVFLIGLVAYLLSFRRGKAAA |
| 2GSM Chain:A ((24-515)) | ---------TNHKDIGVLYLFTGGLVGLISVAFTVYMRMELMAPGVQFMCAEHLESGLVKGFFQSLWPSAVENCTPNGHLWNVMITGHGILMMFFVVIPALFGGFGNYFMPLHIGAPDMAFPRMNNLSYWLYVAGTSLAVASLFAPGGNGQLGSGIGWVLYPPLST--------SESGYSTDLAIFAVHLSGASSILGAINMITTFLNMRAPGMTMHKVPLFAWSIFVTAWLILLALPVLAGAITMLLTDRNFGTTFFQPSGGGDPVLYQHILWFFGHPEVY-IIVLPAFGIVSHVIATF-AKKPIFGYLPMVYAMVAIGVLGFVVWAHHMYTAGLSLTQQSYFMMATMVIAVPTGIKIFSWIATMWGGS---IELKTPMLWALGFLFL-FTVGGVTGIVLSQASVDRYYHDTYYVVAHFHYVMSLGAVFGIFAGIYFWIGKMSG--R---QYPEWAGKLHFWMMFVGANLTFFPQHFLGRQ-----GMPRRYID--YP---EAFATWNFVSSLGAFLSFASFLFFLGVIFYTLTRG |
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General information:
TITO was launched using:
| RESULT:
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Template: 2GSM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -530977 for 3669 contacts (-144.7/contact) +
2D Compatibility (PS) -43462 + (NN) -19063 + (LL) 2276
1D Compatibility (HY) -19600 + (ID) 3200
Total energy: -614026.0 ( -167.36 by residue)
QMean score : 0.306
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