Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSRILAVHASPRGERSQSRRLAEVFLAAYREAHPQARVARREVGRVPLPAVTEAFVAAAFHPQPEQRSLAMQADLALSDQLVGELFDSDLLVISTPMYNFSVPSGLKAWIDQIVRLGVTFDFVLDNGVAQYRPLLRGKRALIVTSRGGHGFGPGGENQAMNHADPWLRTALGFIGIDEVTVVAAEGEESGGRSFEDSCDEAEQRLLALARSA
2V9C Chain:B ((5-215))
-SRILAVHASPRGERSQSRRLAEVFLAAYREAHPQARVARREVGRVPLPAVTEAFVAAAFHPQPEQRSLAMQADLALSDQLVGELFDSDLLVISTPMYNFSVPSGLKAWIDQIVRLGVTFDFV------QYRPLLRGKRALIVTSRGGHGFGPGGENQAMNHADPWLRTALGFIGIDEVTVVAAEG------------DEAEQRLLALARSA
General information:
TITO was launched using:
RESULT:
Template:
2V9C.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -128531 for 1529 contacts (-84.1/contact) +
2D Compatibility (PS) -21751 + (NN) -17407 + (LL) 488
1D Compatibility (HY) -24800 + (ID) 9650
Total energy: -201651.0 ( -131.88 by residue)
QMean score : 0.624
(partial model without unconserved sides chains):
PDB file :
Tito_2V9C.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2V9C-query.scw
PDB file :
Tito_Scwrl_2V9C.pdb
: