Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSELILLHNPRCSKSRAALELLEARGLQPQVVRYLETPPSAAELKAILAKLGI-PARQLLRTGEDEYKALGLDEPSLGEEAIIEAMARHPKLIERPVLVAGDKAVVGRPPERVLEILA
3F0I Chain:A ((3-119))
AMSVVIYHNPKCSKSRETLALLENQGIAPQVIKYLETSPSVEELKRLYQQLGLNEVRAMMRCKEELYKELNLGDSQLSDDALFAAMAEHPKLIERPIVVCNGQARHGRPPEQVLEIL-
General information:
TITO was launched using:
RESULT:
Template:
3F0I.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -81157 for 873 contacts (-93.0/contact) +
2D Compatibility (PS) -13212 + (NN) -13458 + (LL) 144
1D Compatibility (HY) -13200 + (ID) 2950
Total energy: -123833.0 ( -141.85 by residue)
QMean score : 0.810
(partial model without unconserved sides chains):
PDB file :
Tito_3F0I.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3F0I-query.scw
PDB file :
Tito_Scwrl_3F0I.pdb
: