Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMRAVVELLAGARRLVIFTGAGVSAESGIPTFRDALGGLWARYDPAALATPAAFADDPALVWGWYEWRRLKVLGVQPNPAHRAIAALSGRIANTRLVTQNVDDLHERAGSRDVLHLHGSLHAPRCATCAAAYRDALPDSVE-PEEGRRIEPPRCPACGGQ-VRPGVVWFGEALPEAALREAFAAACECDLLLSVGTSGVVQPAARIPGLALEHGASVVHVNPQPVRTRHPREHCLVGPAGEVLPELLRRAFPG
1YC2 Chain:C ((5-243))IRKAAEILAKSKHAVVFTGAGISAESGIPTFRGE-DGLWRKYDPEEVASISGFKRNPRAFWEFSMEMKDKLFA-EPNPAHYAIAELERMGIVKAVITQNIDMLHQRAGSRRVLELHGSMDKLDCLDCHETY-----DWSEFVEDFNKGEIPRCRKCGSYYVKPRVVLFGEPLPQRTLFEAIEEAKHCDAFMVVGSSLVVYPAAELPYIAKKAGAKMIIVNAEPTMADPIFDVKIIGKAGEVLPKIVEEVKRL


General information:
TITO was launched using:
RESULT:

Template: 1YC2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -132635 for 1960 contacts (-67.7/contact) +
2D Compatibility (PS) -25354 + (NN) -15062 + (LL) 572
1D Compatibility (HY) -17600 + (ID) 5300
Total energy: -195379.0 ( -99.68 by residue)
QMean score : 0.527

(partial model without unconserved sides chains):
PDB file : Tito_1YC2.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1YC2-query.scw
PDB file : Tito_Scwrl_1YC2.pdb: