Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKSKISEYTEKEFLEFVKDIYTNNKKKFPTEESHIQAVLEFKKLTEHPSGSDLLYYPNENREDSPAGVVKEVKEWRASKGLPGFKAG
1FR2 Chain:A ((4-85))
-KHSISDYTEAEFLQLVTTICNADT---SSEEELVKLVTHFAEMTEHPSGSDLIYYPKEGDDDSPSGIVNTVKQWRAANGKSGFKQ-
General information:
TITO was launched using:
RESULT:
Template:
1FR2.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -10360 for 538 contacts (-19.3/contact) +
2D Compatibility (PS) -9048 + (NN) -8122 + (LL) 296
1D Compatibility (HY) -7600 + (ID) 2100
Total energy: -36934.0 ( -68.65 by residue)
QMean score : 0.774
(partial model without unconserved sides chains):
PDB file :
Tito_1FR2.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1FR2-query.scw
PDB file :
Tito_Scwrl_1FR2.pdb
: