Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTLRNGVPSMTKDEKEKTHVDAIIERYKDLMVEIPPADRQPGLSLLWPVPAQPAIDKGVRQAENWLADQIEGQLWTAFAFGRDSLPTPMQKTAFEVAFLTRLQQRLVAARRSG
1PU1 Chain:A ((1-91))
MSLRK-----LTEGDLDEISSFLHNTISDFILK--------------RVSAKEIVDIDITVLVEY-TDELKVDISAELYLDELSDADPGIVDEAVDAAYRSLESFLDGFRE--
General information:
TITO was launched using:
RESULT:
Template:
1PU1.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -4098 for 553 contacts (-7.4/contact) +
2D Compatibility (PS) -9594 + (NN) -2272 + (LL) 592
1D Compatibility (HY) -3600 + (ID) 700
Total energy: -19672.0 ( -35.57 by residue)
QMean score : 0.420
(partial model without unconserved sides chains):
PDB file :
Tito_1PU1.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1PU1-query.scw
PDB file :
Tito_Scwrl_1PU1.pdb
: