Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MQRIRIIDSHT----GGEPTRLVIGGFPDLGQGDMAERRRLLGERHDAWRAACILEPRGSDVLVGALLCAPVDPEACAGVIFFNNSGYLGMCGHGTIGLVASLAHLGRIGPGVHRIETPVGEVEATLHED-GS---VSVR-NVPAYRYRR--QVSVEVPGI--GRVSGDIAWGGNWFFLVAG-H-G-Q-RLAGDNLDALTAYTVAVQQALDDQDIRGEDGGAIDHIELFADD-PHADSRNFVLCPGKAY-DRSPCGTGTSAKLACLAADGKLL-PGQPWRQASV---IGSQFEGRYEWLDGQPGGPIVPTIRGRAHVSAEATLLLADDDPFAWGIRR |
| 1XUB Chain:A ((21-298)) | MHNYVIIDAFASVPLEGNPVAVFFDAD----DLP-PAQMQRIAREMNLSES--------------TFVLKPR-NGGDALIRIFTPVNELPFAGAPLLGTAIALGAHTDN--HRLYLETQMGTIAFELERQNGSVIAASMDQPIPTWTALGRDAELLKALGISDSTFPIEIYHNGPRHVFVGLPSIDALSALHPDHR-ALSNFH---------------D-MAI---NCFAGAGRRWRSRMFS--PAYGVVEDAATGSAAGPLAIHLARHGQIEFGQPVEILQGVEIGRPSLMFAKAEGRA---EQLTRVEVSGNGVTFGRGTIVL------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1XUB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -105973 for 2224 contacts (-47.6/contact) +
2D Compatibility (PS) -27865 + (NN) -10811 + (LL) 1984
1D Compatibility (HY) -5600 + (ID) 2450
Total energy: -150715.0 ( -67.77 by residue)
QMean score : 0.388
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