Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
-MRKIFLACPYSHADAEVVEQRFRACNEVAATIVRAGHVVFSQVSMSHPINLCLAELDRAAIGRLWAPVDAFYMDHLEELIVLDLPGWRDSAGIRREMEFFEAGGQRVSLWSEVEHEFR
1T1J Chain:A ((0-118))
HMRKIFLACPYSHADAEVVEQRFRACNEVAATIVRAGHVVFSQVSMSHPINLCLAELDRAAIGRLWAPVDAFYMDHLEELIVLDLPGWRDSAGIRREMEFFEAGGQRVSLWSEVEHEFR
General information:
TITO was launched using:
RESULT:
Template:
1T1J.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -38323 for 868 contacts (-44.2/contact) +
2D Compatibility (PS) -11931 + (NN) 1635 + (LL) 0
1D Compatibility (HY) 5600 + (ID) 400
Total energy: -43419.0 ( -50.02 by residue)
QMean score : 0.298
(partial model without unconserved sides chains):
PDB file :
Tito_1T1J.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1T1J-query.scw
PDB file :
Tito_Scwrl_1T1J.pdb
: