Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MMHPRRLLAVLGVVVLTSMTSCTSFSSS-RSSSMDKTGWITHCFGRFLIDLPPDAVINAGYYLWGDRIEYLDDKPTELAARVDRLEQEWRT-QRHKSKGNMFLRKIDFGNESVGLLSWSSEVASKTYLLD-TYVTSKPTWHVYRWKGKVSVDR-E-QHAVEISRALARNLRSRAPKEIPSEPGFCIDHAYIAGDSFQVERFGVGVTFPEHPGARFEFRSSTGAELNSLLERVDGFVQNMLSTFAGMETLRKGKHPVGSLPGEEYLVAGSDKGQRGYTFMWEVQGKEESLTEPNLTAGLAVLERSNENGKPPPPAFKSDKEALELWDTIVDSIRVRPTSSSPRGGNAGPSPAPKPATP-GGQTLGDHYVYEEFLSSLKPKDSWLDDL |
| 4L4W Chain:A ((1-267)) | --------------------------GHMGPNAVELTTDQAWCLADVL---------GAGSYPWVLAITPPYSDHSQRSAFLAAQSAELTRMGVVNSAGAVDPRVAQWITTVCRATQWLDLRF--VLLRGMVARRSEETVVALRNAQLVTFTAMDIGHQHALVPVLTAGLSGRKPARFDD------------------------FALPAAAGARADEQIRNGAPLAEVLEFL------------------------GVPPSARPLVESVFDGRRTYVEIVAGEHRDGHRVT--------------------------TEVGVSIIDTPHGRILVHPTKAFDGEWISTFTPGSADAIAMA---------VERLTASL-PSGSWF--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4L4W.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 13382 for 1941 contacts (6.9/contact) +
2D Compatibility (PS) -26253 + (NN) -937 + (LL) 6112
1D Compatibility (HY) -6000 + (ID) 2700
Total energy: -16396.0 ( -8.45 by residue)
QMean score : 0.205
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