Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLAQFTPSALADLANCVLRIPLALQQPSSVAMTLPSLTSFMPHFGAPALLLLQLLAALPATAAETDATPLRFSVMESWSMPLVRLQRGQPIDGIVYDITRSLARQVGRKALYHPYPRGRIEQAMNAGEIDVRCYISPAWLSHDFPGYRWSVALLVQRDILVAREGFA---PIPEALP--AQRIGTVLGYSYPR-LQALFDIGRLRRDDARTQDLVLEKLRAGRYRYAVSHQLSLHWSNRQAPGQPPLQEAAQLEETAVSCMVRDSAEVPVEAILKTFEEMKRSGEIEEILQRYR |
| 3KBR Chain:A ((9-236)) | -------------------------------------------------------------DRILESGVLRVATT-GDYKPFSYRTEEGGYAGFDVDMAQRLAESLGAKLVVVPTSWPNLMRDFADDRFDIAM-SGISINLERQRQAYFSIPYLRDGKTPITLCSEEARFQTLEQIDQPGVTAIVNPGGTNEKFARANLK--KARILVHPDNVTIFQQIVDGKADLMMTDAIEARLQSRLHPELCAVHP-QPFDFAEKAYLLPR-DEAFKRYVDQWLHIAEQSGLLRQRMEHWL |
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General information:
TITO was launched using:
| RESULT:
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Template: 3KBR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -127797 for 1739 contacts (-73.5/contact) +
2D Compatibility (PS) -23527 + (NN) -5597 + (LL) 5616
1D Compatibility (HY) -2800 + (ID) 1150
Total energy: -155255.0 ( -89.28 by residue)
QMean score : 0.370
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