Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAFLLIGLSEHRPLPLGQGSPLRWLALLFGLLAWHAGAGERVIYPRHSEGRNPEPYVVELLQLALAR-SGGDYRLEPSAQPM-PQSRAQLRLEQDDPGLQVMWAQS-RDDLEETLLPIRIPIYRGLIGWRIPLVSAANKDILASARTLDDLRRLRFGQRQDWADTPILRAN--GLEVKTSQNYESLFRMLDAGRFEVFPREVVVIDGELEDASRAGLHLAIDQHLALHYPAAFYFFVSRQRPELAEAIRQGLEKAIADGSFERLFERHFKTRLEKLALRQRRIIELKNPYLPGKTPFQREALWYRP |
| 3MPK Chain:A ((48-251)) | ----------------------------------------------FRTDEQFGGISAAVLQLLQLRTGL---DFEII--GVDTVEELIAKLRSG--EADMAGALFVNSARESFLSFS-RPYVRNGM---VIVTRQDPD----APVDADHLDGRTVALVRNSAAIPLLQRRYPQAKVVTADNPSEAMLMVANGQADAVVQTQISASYYVNRYFA--GKLRIASALD-LPPAEIALATTRGQTELMSILNKALYSISN-DELASIISRWR------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3MPK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -104593 for 1489 contacts (-70.2/contact) +
2D Compatibility (PS) -21246 + (NN) -7439 + (LL) 6820
1D Compatibility (HY) -2000 + (ID) 1550
Total energy: -130008.0 ( -87.31 by residue)
QMean score : 0.482
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