Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKTWIVLPVLALTLAGCAGKTAYRENCADQLDAAWKELDLAKAEGFAGTVSYSKALTLLTGAKTQQQFEAYEGCTSKAEKARFYIRESRAGR
2IJR Chain:A ((42-51))
----------RLFLAGCAGILKPVKCMEYPPFPRLVSHGTGSAVASNLAFQHWLDLLLKDAVLDGDTIRQIDRIYLQSGIASVKWETIPEGA
General information:
TITO was launched using:
RESULT:
Template:
2IJR.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 1077 for 31 contacts (34.7/contact) +
2D Compatibility (PS) -1019 + (NN) -365 + (LL) 1280
1D Compatibility (HY) -1200 + (ID) 350
Total energy: -577.0 ( -18.61 by residue)
QMean score : -0.283
(partial model without unconserved sides chains):
PDB file :
Tito_2IJR.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2IJR-query.scw
PDB file :
Tito_Scwrl_2IJR.pdb
: