Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAQIFNPNPGNTLDTVANALKEQANAANKDVNDAIKALQGTDNADNPALLAELQHKINKWSVIYNINSTVTRALRDLMQGILQKI
2X43 Chain:S ((8-55))
------------------QMKNAAAEAKDNVHDKIQELK--DDVGNKAA------------EVRDAVSSTVESIKDKLSGGSSSR
General information:
TITO was launched using:
RESULT:
Template:
2X43.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 537 for 274 contacts (2.0/contact) +
2D Compatibility (PS) -5072 + (NN) -2415 + (LL) 1600
1D Compatibility (HY) -400 + (ID) 650
Total energy: -6400.0 ( -23.36 by residue)
QMean score : 0.346
(partial model without unconserved sides chains):
PDB file :
Tito_2X43.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2X43-query.scw
PDB file :
Tito_Scwrl_2X43.pdb
: