Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --MSRDRLYTWAGLWRSPSSSWEALRLEDDQAESQLRAPDERSGLPYQLDYRLRWDADWHLREAVFHVESETGVRKLHLLADGRGHWQDGDGE------ALPAFDGCLDIDIWPSPFTNTFPIRRLGLADGQRAEIRALYIE-APALEPRSMRQAYTRLDAS----HYLYENLEGSAF---KAVLLVDEQG---------------------LVIDYPGLFQRL------- |
| 4U8U Chain:M ((3-224)) | TYKDRRFQYILTNQHLFIDKLERDLHEIDDEFKKLGSDVKDQTVRHLKARISNLEGDDCKEHEAPCGGDVPQCISDLFF-CDGHKDCKNGRDEDKEVCSEVPADIG--------SSFAGVVSWQACEEATPHHAVVTITANERKEFFKPRIWVRAILAFEEEEHEHHIKTFQLRGYYSFGDRTLALGPERGTKPVYGVRCHFDRGDDDHADCQIVNPASLFVCGNFAAERH |
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General information:
TITO was launched using:
| RESULT:
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Template: 4U8U.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -5049 for 982 contacts (-5.1/contact) +
2D Compatibility (PS) -18311 + (NN) 5398 + (LL) 680
1D Compatibility (HY) -800 + (ID) 1600
Total energy: -19682.0 ( -20.04 by residue)
QMean score : -0.011
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