Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTLKGKTALVTGSTSGIGLGIALSLAEAGADLLLNGFGEVDAALAQVRARGVRAEHHPADLSSPEQIGELMAFAERTFGGVDILVNNAGIQYVAPVQEFPTERWDAIIAINLSSVFHTTRLALPGMLARGWGRIVNIASTHGLVASAGKSAYVAAKHGVLGLTKSVALETARTPVTCNAICPGWVLTPLVQKQIDARTAEGVSPEQAEHDLLAEKQPSLAFVTPEQLGGLTLFLCSEAADQVRGAAWNMDGGWVAQ
2Q2Q Chain:G ((1-255))
-TLKGKTALVTGSTSGIGLGIAQVLARAGANIVLNGFGDPAPALAEIARHGVKAVHHPADLSDVAQIEALFALAEREFGGVDILVNNAGIQHVAPVEQFPLESWDKIIALNLSAVFHGTRLALPGMRARNWGRIINIASVHGLVGSTGKAAYVAAKHGVVGLTKVVGLETATSNVTCNAICPGWVLTPLVQKQIDDRAA----PLQAQHDLLAEKQPSLAFVTPEHLGELVLFLCSEAGSQVRGAAWNVDGGWLAQ
General information:
TITO was launched using:
RESULT:
Template:
2Q2Q.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -149149 for 2199 contacts (-67.8/contact) +
2D Compatibility (PS) -27215 + (NN) -8764 + (LL) 304
1D Compatibility (HY) -29200 + (ID) 9650
Total energy: -223674.0 ( -101.72 by residue)
QMean score : 0.582
(partial model without unconserved sides chains):
PDB file :
Tito_2Q2Q.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2Q2Q-query.scw
PDB file :
Tito_Scwrl_2Q2Q.pdb
: