Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNGSGHEATSTPPRRSHWRWLRRLLTLAFFVL-VPVLLFLLVKNLDWQEVRHALGEYRPATLFLGLLLAAAGYTVFSSFDLLSRYYIGHSLPKRRVFTVAFVCNAFNLNLSSWVGAVALRYRLYSRLGLDIADITRILTFSLVTNWFGYLLLAGILFSCGLPALPPGWKLGSDGLRLIGALLLALAAGYLLACRFARRRAWGWREHRLTLPSWRLAALQGLLGASNWSLMALLLYSLLPHSVDYPSVLAILLISSIAGVITHIPAGLGVLEAVFIALLQGRLSQGVLLAALIGYRVLYF-----------LLPLALACVVYLLLERRAIRLRRKQRRLRQGQA |
| 1ZSW Chain:A ((11-338)) | VDLGTENLYFQSNAMYE---IKGHHHISMVTKNANENNHFYKNVLGLRRVKMTVNQDDPSMYHLFYGDKTGSPGTELSFFEIPLVGRTYR-GTNAITRIGLLVPS-EDSLHYWKERFEKFD--VKHSEMTTYANRPALQFEDAEGLRLVLLVSNGEKVEHWETWEKSEVPAKHQIQGMGSVELTVRRLDKMASTLTE--IFGYTEVSRNDQEAIFQSIKG----EAFGEIVVKYLDGPTEKPGRGSIHHLAIRVKNDAELAYWEEQVKQRGFHSSGIIDRFYFKSLYFRESNGILFEIATDGPGFTVDGDVEHLGEKLDLPPFLEDQRAEIEANLAPIEEK-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1ZSW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -343209 for 2571 contacts (-133.5/contact) +
2D Compatibility (PS) -32335 + (NN) 1542 + (LL) 1784
1D Compatibility (HY) -1200 + (ID) 1150
Total energy: -374568.0 ( -145.69 by residue)
QMean score : 0.175
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