Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAEINIYQNPGQSLANIYKGFARQCNPGFVFPEAQTIEAWDIPLRLHPEFIPGGDISKADQQYSTLLAQEIANGVTIGFRMVNEKERVCNVEILPLLTSMAQNLDRIKARFGSGYLDRFKGSPNVYPTDVGFSTDASGGISQESGLLVSYGVNLRTLTPGTWQAMTLPEDIKALVGPGVGLRLDAPNFSDVFNTIKSGLRYTTAVTLLLAYFAAI
2IGS Chain:B ((4-217))
-AEINIYQNPGQSLANIYKGFARQCNPGFVFPEAQTIEAWDIPLRLHPEFIPGGDISKADQQYSTLLAQEIANGVTIGFRMVNEKERVCNVEILPLLTSMAQNLDRIKARFGSGYLDRFKGSPNVYPTDVGFSTDASGGISQESGLLVSYGVNLRTLTPGTWQAMTLPEDIKALVGPGVGLRLDAPNFSDVFNTIKSGLRYTTAVTLLLAYFAAI
General information:
TITO was launched using:
RESULT:
Template:
2IGS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -132525 for 1676 contacts (-79.1/contact) +
2D Compatibility (PS) -22508 + (NN) -9235 + (LL) 208
1D Compatibility (HY) -30400 + (ID) 10700
Total energy: -205160.0 ( -122.41 by residue)
QMean score : 0.574
(partial model without unconserved sides chains):
PDB file :
Tito_2IGS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2IGS-query.scw
PDB file :
Tito_Scwrl_2IGS.pdb
: