Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTVKISQTADVQRFFEEASGQLNERGDPRTKALVRRILDDTAKLIEEMQVTPDEFWKAVDYLNRLGSRQEAGLLAAGLGLEHYLDLLLDAQDAEAGLTGGTPRTIEGPLYVAGAPLSDGEARMDDGR--DAGTVMFLQGRVSGPDGQPLAGAIVDVWHANTQGTYSYFDSS-QSEYNLRRRIRTDADGRYRARSIVPSGYGCPSDGPTQELLDR-LGRHGQRPAHIHFFVSAPGHRHLTTQINLAGDRYLWDDFAYATRDGLIGDLRFNDDPAAARDRGVEGGRFAELDFDFQLQASPAPAAERRSQRPRALQG |
| 3O6R Chain:B ((5-255)) | ----------------------------RVIELFDEFTDLIRDFIVRHEITTPEYETIMQYMISVG---EAG--EWPLWLDAFFETTVDS--VSYGKGNWTSSAIQGPFFKEGAPLLTGKPATLPMRADEPGDRMRFTGSVRDTSGTPITGAVIDVWHSTNDGNYSFFSPALPDQYLLRGRVVPAEDGSIEFHSIRPVPYEIPKAGPTGQLMNSYLGRHSWRPAHIHIRITADGYRPLITQLYFEGDPYLDSDSCSAVKSELVLPVNKID---------IDGETWQLVDFNFILQ------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3O6R.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -67436 for 1806 contacts (-37.3/contact) +
2D Compatibility (PS) -26890 + (NN) -16270 + (LL) 3540
1D Compatibility (HY) -16800 + (ID) 4200
Total energy: -128056.0 ( -70.91 by residue)
QMean score : 0.483
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