Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMRIENRVFLVTGGSSGLGAATAKMLVEQGGKVVLADINAEAGAAKAAELGAQARFVRADIASEADGRQAVAAALEAFGGLHGLANCAGVAPAEKVLGRNGIHALESFRRVIDINLVGSFNMLRLAAEAMSQGQPDEGGERGVIVNTASVAAFDGQIGQAAYSASKSGVVGMTLPIARELARFGIRVMTIAPGIFETPMMAGMPQEVRDSLGASVPFPPRLGRPDEYAALVRQIIENSMLNGEVIRLDGAIRMAAR
4PN3 Chain:E ((9-263))MQIENRVFLITGAGSGLGAAVSKMAVEAGAKVVLLDVNAEAGEAGAKALGASARFQRTDVASDTDGKAAIAAAIEAFSRIDVLVNCAGVAPGEKVLGREGAHKLETFTRTISINLIGTFNMLRLAAEAMAKNEPGQGGERGVIINTASVAAFDGQIGQAAYSASKGGVAAMTLPVARELARHGIRVMTIAPGIFKTPMMAGMPQEVQDALGASVPFPPRLGEPAEYAALVRHIVENQMLNGEVIRLDGALRMAAK


General information:
TITO was launched using:
RESULT:

Template: 4PN3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -134759 for 2193 contacts (-61.4/contact) +
2D Compatibility (PS) -28124 + (NN) -12561 + (LL) 0
1D Compatibility (HY) -27200 + (ID) 9600
Total energy: -212244.0 ( -96.78 by residue)
QMean score : 0.555

(partial model without unconserved sides chains):
PDB file : Tito_4PN3.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4PN3-query.scw
PDB file : Tito_Scwrl_4PN3.pdb: