Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTLTSIGPANRMARSAETHPLTWRLREDAQPVWLEEYQSKDGYAAARKALTQMAQDDIVQTVKDSGLKGRGGAGFPTGVKWGLMPKDESLNIRYLLCNADEMEPNTWKDRMLMEQLP---HLLVEGMLISARALKAYRGYIFLRGEYVDAARNLNRAIDEAKAAGLLGKNILGSGFDFELFVHTGAGRYICGEETALINSLEGRRANPRSKPPFPAAVGVWGKPTCVNNVETLCNVPAIVGNGVDWYKTLARPGSEDMGTKLMGFSGKVKNPGLWELPFGVSARELFEDYAGGMRDGFQLKAWQPGGAGTGFLLPEHLDAQMFAGGIAKVGTRMGTGLAMAVDDSINMVSLLRNMEEFFARESCGWCTPCRDGLPWSVKLLRALERGEGQPGDLETLEQLVNFLGPGKTFCAHAPGAVEPLGSALKYFRAEFEAGISRQPSAAPRPATVGA |
3RHZ Chain:A ((10-339)) | ----------------------------CMRVYITNINGQSIQSTAQLCQNTVTDVAVSLGYRELGIY---------------CYQIHTDSESELSKRLDGIVAGLRHGDVVIFQTPTWNTTEFDEKLMNKLKLYDIKIVLFIHD--VVPLMFSGNFYLMDRTIAYYNKA-----------------DVVVAPSQKMIDKLRDFGMNVSKTVVQ----GMWDHPTQAPMFPAGLKREIHFPGNPERFSFVKEW-KYDIPLKVYTWQNVELPQNVHKINY-RPDEQLLMEMSQG---GFGL-----------VWMDDKDKEYQSLYCSYKLGSFLAAGIPVIVQEGIAN-------QELIENNGLGWIVK-----------------------DVEEAIMKVKNVN---------EDEYIELVKNVRSFNPILRKGFFTRRLLTESVFQAIC |
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General information:
TITO was launched using:
| RESULT:
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Template: 3RHZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -72947 for 2661 contacts (-27.4/contact) +
2D Compatibility (PS) -35111 + (NN) -8707 + (LL) 4688
1D Compatibility (HY) -16000 + (ID) 2000
Total energy: -130077.0 ( -48.88 by residue)
QMean score : 0.280
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