Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTFVVLEECIRCKHTDCVEVCPVDCFYEGPNFLVIHPDECIDCALCEPECPVAAIRAEDEVPLGQRQFIALNGELAAHPNWTQITRKK-PAPDDHDAWFGLPGKLAELDRNGA
1B0V Chain:D ((1-106))
-AFVVTDNCIKCKYTDCVEVCPVDCFYEGPNFLVIHPDECNDCALCEPECPAQAIFSEDEVPEDMQEFIQLNAELAEV--WPNITEKKDPLPDAED-WDGVKGKLQHLER---
General information:
TITO was launched using:
RESULT:
Template:
1B0V.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -85605 for 810 contacts (-105.7/contact) +
2D Compatibility (PS) -11450 + (NN) -10312 + (LL) 24
1D Compatibility (HY) -12000 + (ID) 3650
Total energy: -122993.0 ( -151.84 by residue)
QMean score : 0.404
(partial model without unconserved sides chains):
PDB file :
Tito_1B0V.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1B0V-query.scw
PDB file :
Tito_Scwrl_1B0V.pdb
: