Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MAILVIAEHNNAALAAATLNTVAAAKAIGGDIHVLVAGQNVAA-VAEAAAKVEGVSKVLVADNAAYAHQLPENVAPLIAEL-G-KNYSHVLAPATTNGKNFLPRVAALLDVDQISEIVEVVSPDTFKRPIYAGNAIATVQSSAAVKVITVRTTGFDAVAAEGGSAAVEQVSGPADAGKSAFVGEELAKSDRPELTAAKIVVSGGRGMQNGDNFKILYALADKLGAAVGASRAAVDAGFVPNDMQVGQTGKIVAPQLYIAVGISGAIQHLAGMKDSKVIVAINKDEEAPIFQVADYGLVADLFDAVPELEKAV |
1EFV Chain:A ((2-312)) | QSTLVIAEHANDSLAPITLNTITAATRLGGEVSCLVAGTKCDKVAQDLCKV-AGIAKVLVAQHDVYKGLLPEELTPLILATQKQFNYTHICAGASAFGKNLLPRVAAKLEVAPISDIIAIKSPDTFVRTIYAGNALCTVKCDEKVKVFSVRGTSFDAAATSGGSASSEKASSTSPVEISEWLDQKLTKSDRPELTGAKVVVSGGRGLKSGENFKLLYDLADQLHAAVGASRAAVDAGFVPNDMQVGQTGKIVAPELYIAVGISGAIQHLAGMKDSKTIVAINKDPEAPIFQVADYGIVADLFKVVPEMTEIL |
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General information:
TITO was launched using:
| RESULT:
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Template: 1EFV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -208943 for 2650 contacts (-78.8/contact) +
2D Compatibility (PS) -33241 + (NN) -13549 + (LL) 192
1D Compatibility (HY) -30800 + (ID) 9450
Total energy: -295791.0 ( -111.62 by residue)
QMean score : 0.555
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