Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSTIEERVKKIVAEQLGVKEEEVTNSASFVEDLGADSLDTVELVMALEEEFETEIPDEKAEKITTVQEAIDYIVAHQQ
3EJD Chain:E ((20-95))
MSTIEERVKKIIGEQLGVKQEEVTNNASFVEDLGADSLDTVELVMALEEEFDTEIPDEEAEKITTVQAAIDYINGH--
General information:
TITO was launched using:
RESULT:
Template:
3EJD.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -36429 for 504 contacts (-72.3/contact) +
2D Compatibility (PS) -8162 + (NN) -2424 + (LL) 240
1D Compatibility (HY) -9200 + (ID) 3350
Total energy: -59325.0 ( -117.71 by residue)
QMean score : 0.696
(partial model without unconserved sides chains):
PDB file :
Tito_3EJD.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3EJD-query.scw
PDB file :
Tito_Scwrl_3EJD.pdb
: