Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSAHKDFTLAPRASGSVSWVETLVISALALGLGWWFSPDDPLQVNATFPWVILAPLLLGMRYGFVRGLASAALLVAALFAFRARGVEAYAQVPAAFIVGVLLCAMLVGEFRDIWERRLERLELANEYRQLRLDEFTRAHHILRISHDRLEQRVAGNDQSLRSSLLGLRQLLRELPGDEAPLDALAETVLALLAQYG-SLRIAGLYRVRYDRTPEPQPLATLGEM--PALDADDLLVRTCLERGELVSVRQELLERG--EQRAHSALQVCVPLVDTDGRILALLAVEQMPFFVFNERTFSLLAILAGHIADLLQSDRRALQLADIDAQRFSQYLKRSLLDARDHGLPACLYAFELTDARYGEEVQRLLEGSQRGLDVQLRLRNDEGRRVLLVLLPLTSAEGSQGYLQRLRILFAERFGQARELESLGVRIRQYELDAGNDRQALGHFLFNECGLNDQQVAI |
| 3RFB Chain:A ((20-167)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------NEELSFLLEGETNVL-ANLSNASALIKSRFPNTVFAGFYLFDGKE---LVLGPFQGGVSCIRIALGKGVCGEAAHFQETVIVGDVTTYLNYISCDSLAKSEIVVPMMK-NGQLLGVLDLDSSEIEDYDAMDRDYLEQFVAILLEKTTWDFTMF--------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3RFB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -120462 for 1079 contacts (-111.6/contact) +
2D Compatibility (PS) -15384 + (NN) -6574 + (LL) 25032
1D Compatibility (HY) -3200 + (ID) 1050
Total energy: -121638.0 ( -112.73 by residue)
QMean score : 0.428
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