Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRLQRGFTLLELLIAIAIFALLALATYRMFDSVMQTDQATRVQEQRMRELVRAMGALERDLTQAVERPVRDELGDNRGAFLSEGENDQIVEFTRGGWRNPLGQARSRLQRVRWSLSGETLERRYWLVLDRAQDSKPRVQQVLDGVTALSWRFLDKEHNWQGHWPTDEGSEEERLESLPLAVEMTLEHRHYGKLVRVWRLLDPPLKQDQPQGQPGGENGENGEGGVPQPPEGMPGAPE |
| 2KDR Chain:X ((1-28)) | -----------------------------------------------------------------------------------------------------------------------------------SDAAARVTAILSSLTVT--QLLRRLHQWIS---------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2KDR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 2198 for 106 contacts (20.7/contact) +
2D Compatibility (PS) -2925 + (NN) -643 + (LL) 13772
1D Compatibility (HY) -2400 + (ID) 400
Total energy: 9602.0 ( 90.58 by residue)
QMean score : 0.124
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