Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKNFALIGAAGYIAPRHMRAIKDTGNCLVSAYDINDSVGIIDSISPQSEFFTEFEFFLDHASNLKRDSATALDYVSICSPNYLHYPHIAAGLRLGCDVICEKPLVPTPEMLDQLAVIERETDKRLYNILQLRHHQAIIALKDKVAREKSPHKYEVDLTYITSRGNWYLKSWKGDPRKSFGVATNIGVHFYDMLHFIFGKLQRNVVHFTSEYKAAGYLEYEQARVRWFLSVDANDLPESVKGK-KPTYRSITVNGEEMEFSEGFTDLHTTSYEEILAGRGYGIDDARHCVETVNTIRSAVIVPASDNEGHPFVAALAR |
3OA0 Chain:B ((3-312)) | MTRFALTGLAGYIAPRHLKAIKEVGGVLVASLDPATNVGLVDSFFPEAEFFTEPEAFEAYLEDL-RDRGEGVDYLSIASPNHLHYPQIRMALRLGANALSEKPLVLWPEEIARLKELEARTGRRVYTVLQLRVHPSLLALKERLGQEKGAK--DVVLTYVTGRGKWYGKSWKVDEAKSGGLATNIGIHFFDLLAWLFGRALHVEVHARTPTVNAGYLELEGARVRWFLSIDPSFVPEPLRRQGKRTYRSIAVDGEEVEFSEGFTDLHTEVYRKTLAGEGFGLDEAAEAIRVAALLRTLPLSQPSPENRHPFLG---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3OA0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -218426 for 2625 contacts (-83.2/contact) +
2D Compatibility (PS) -32892 + (NN) -11676 + (LL) 784
1D Compatibility (HY) -25600 + (ID) 7700
Total energy: -295510.0 ( -112.58 by residue)
QMean score : 0.521
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