Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKQHRLAAAIALVGLVLSGCDSQTNVELKTPAQKASYGIGLNMGKSLSQEGMDDLDSKAVAKGIEDALGKKKQQLTDEELTEAFAFLQKRAEERMAAIGDENAKAGKKFLEENGKRDGVTTTASGLQYEIVKKADGPQPKATDVVTVHYEGRLTDGTVFDSSIERGSPIDLPVSG--VIPGWVEALQLMHVGEKIKLYIPSELAYGAQSPSPAIPANSVLVFDMELLGIKDPSKPDAEPEAGAAAQPEAKADAKK |
4GIV Chain:B ((99-209)) | ----------------------------------------------------------------------------------------------------------------------VVTTESGLKYEDLTEGS--EARAGQTVSVHYTGWLTDGQKFGSSKDRNDPFAFVLGGGMVIKGWDEGVQGMKVGGVRRLTIPPQLGYGARGAGGVIPPNATLVFEVELLDV-------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4GIV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -59757 for 805 contacts (-74.2/contact) +
2D Compatibility (PS) -11164 + (NN) -2168 + (LL) 8388
1D Compatibility (HY) -8400 + (ID) 2450
Total energy: -75551.0 ( -93.85 by residue)
QMean score : 0.544
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