Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MPIHWKPFLAPSTLALKFAIKTLLAGGLALWCAFRFDLEQPQWALMTVLIVSQPLSGMVVAKGLFRLLGTLVGTAMSVLMIALFAQAPWLFLLAISLWLGLCTAASTSLRNHVSYAFVLSGYTVAIIGLPAVDQPLLVFEQAVARCTEICLGIICASAVSAILWPQRVEQNLDKQAHATWLLGMQAARGEIDPRQRQPQGLLNALSKIVEVDAQRDHAWFEGERGRRRAGALALLSRDLLSLLRTARGVARQRARLSEEEERRVERWLAALASALEGTDPASMQALREELAQVAVEPQWSNDQRYLLTRCSVLLLKAVNAEKGMRAVASGEVEGRVGSAGTLSWHRDLQMALFYGTRSALALLGLSVYWIYTAWPAASGAMLLAAVVCSLFANRDNAVAIGLSFLRGIVYAIPAAMLVSQWLLPQWNGFPLLCLAMGVPLFFATLGMAVPVTAGTATSFAIHFIVLVAPRNQMDYNLATLLNSAQGVLIGVGFAVVIFRLLTLRPGWLTRRLLDATCVDLGRLTRRPLAQAENWFGGRMADRLLRLARHANLLPEQERRRWDDGLLALDLGNELIHLRACLEGARGVLRKARDRFLGELGELLEAGPAGPRSDRLERISLPLREALERDARHDDEASRLARAALAQLLFTWQQWCHQEESHESA |
4JWD Chain:B ((155-207)) | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LHSTRKQVEEAGDKLPADDKTAIESALTALETALKGEDKAAIEAKMQELAQVS---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4JWD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -15585 for 290 contacts (-53.7/contact) +
2D Compatibility (PS) -6222 + (NN) -4717 + (LL) 51304
1D Compatibility (HY) -2800 + (ID) 950
Total energy: 21030.0 ( 72.52 by residue)
QMean score : 0.889
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