Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNALLALPDLQPERLFVQSGDVRLAVHCWGAPDNGKPTLLMVHGYPDNHETWLPLIRQLAGRYRIVAYDVRGAGASDKPRWSRDYHLQRLSEDLQAVIRATSPDRPVHLLAHDWGSIQTWESVTDPQCRPLIASYTSISGPCLDHVGFWMREHLRQRSPKALKAVFGQLLHSWYIAFFHTPVVPELLWSAGLARLWPQFLKHAEGVRHPQVNPTQASDGRHGVKLYRGNFIRSLFRPRKRHTEVPVQLIVPTRDRYVGAQLFQHLSLWAPRLWRREASVGHWQLLAEPEQLAGWLGEFIDAQETGESPPALQRAQVRPDASSMNGKLVVVTGAGGGIGRSTLLSFAERGASLLAADLDLEAAERSAELARALGATAHVYQVDVGDTQA-METFAEWVRDTLGVPDVVVSNAGI-GMAGPMLDTSPAEWERLLRVNLWSVIDGCRLFGRQMIAANKPGHLVNVASGVAFAPSRNYPAYATSKAAVLMLSECLRAELAGRSIGVTAVCPGFVDTGIVQATRFVGMDAERQARRQAKIQRFYKRRRLSPDTVGEKLVRAVERNKAVVSVGSEVHLGALQWRFAPWATRFLARFDLTS |
1ZEM Chain:D ((3-226)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KKFNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRD-FGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNY-GRIVNTASMAGVKGPPNMAAYGTSKGAIIALTETAALDLAPYNIRVNAISPGYMGPGFMW---------ERQVELQAKVGSQY--FSTDPKVVAQQMIGSV------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1ZEM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -87656 for 1846 contacts (-47.5/contact) +
2D Compatibility (PS) -24573 + (NN) -10760 + (LL) 25160
1D Compatibility (HY) -14000 + (ID) 3950
Total energy: -115779.0 ( -62.72 by residue)
QMean score : 0.546
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