Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPRLEPGMARIRVKDLRLRTFIGIKEEEILNKQDVLINLTILYPAADAVEVNDIEHALNYRTITKAIIRHVEENRFALLERMTQEILDLVMENPAVRYAEVEVDKPHALRFAESVSITLAGHR
3O1K Chain:A ((15-131))
------SMDKVFIEQLEVITTIGVYDWEQQIKQKLVLDLEMAHDNRAAGKSDDVADALDYAQVSQAVLEHIEQGRFLLVERVAEEVAELIMTRFAVPWLRIRLTKPGAVPQAKGVGVIIERAR
General information:
TITO was launched using:
RESULT:
Template:
3O1K.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -84673 for 816 contacts (-103.8/contact) +
2D Compatibility (PS) -12535 + (NN) -1 + (LL) 308
1D Compatibility (HY) -10400 + (ID) 1650
Total energy: -108951.0 ( -133.52 by residue)
QMean score : 0.466
(partial model without unconserved sides chains):
PDB file :
Tito_3O1K.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3O1K-query.scw
PDB file :
Tito_Scwrl_3O1K.pdb
: