Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSVRHFLSFMDYSPEELIGLIRRGSELK-DLRNRGVLYEPLKSRVLGMVFEKASTRTRLSFEAGMIQLGGQAIFLSPRDTQLGRGEPIGDSARVMSRMLDGVMIRTFAHATLTEFAAHSKVPVINGLSDDLHPCQLLADMQTFHEHRGSIQGKTVAWIGDG-NNMCNSYIEAALKFDFQLRVACPEGYEPKAEFVALA-------GDRLRVVRDPREAVAGAHLVSTDVWASMGQEDEAAARIALFRPYQVNAALLDGAADDVLFMHCLPAHRGEEISEELLDDPRSVAWDQAENRLHAQKALLELLIEHAHYA |
2P2G Chain:D ((2-307)) | --IRHFLRDDDLSPAEQAEVLELAAELKKDPVSRRPLQGP---RGVAVIFDKNSTRTRFSFELGIAQLGGHAVVVDSGSTQLGRDETLQDTAKVLSRYVDAIVWRTFGQERLDAMASVATVPVINALSDEFHPCQVLADLQTIAERKGALRGLRLSYFGDGANNMAHSLLLGGVTAGIHVTVAAPEGFLPDPSVRAAAERRAQDTGASVTVTADAHAAAAGADVLVTDTW------------VKPFRPFQLNSRLLALADSDAIVLHCLPAHRGDEITDAVMDGPASAVWDEAENRLHAQKALLVWLLERS--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2P2G.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -177380 for 2531 contacts (-70.1/contact) +
2D Compatibility (PS) -31185 + (NN) -15624 + (LL) 1608
1D Compatibility (HY) -24000 + (ID) 6600
Total energy: -253181.0 ( -100.03 by residue)
QMean score : 0.539
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