Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNSSRSVNPRPSFAPRALSLAIALLLGAPAFAANSGEAPKNFGLDVKITGESENDRDLGTAPGGTLNDIGIDLRPWAFGQW-GD-WSAYFMGQAVAATDTIE-TDTLQSDTDDGNNSRNDGREPDKSYLAAREFWVDYAGLTAYPGEHLRFGRQRLRED-----SGQWQDTNIEALNWSFE-TTLLNAHAGVAQRFSEYRTDLDELA-----PEDKDRTHVFGDISTQWAPHHRIGVRIHHADDSGHLRRPGEEVDNLDKTYTGQLTWLGIEATGDAYNYRSSMPLNYWASATWLTGDRDNLTTTTVDDRRIATGKQSGDVNAFGVDLGLRWNIDEQWKAGVGYARGSGG-GKDGEEQFQQTGLESNRSNFTGTRSRVHRFGEA----FRGELSNLQAATLFGSWQLR----EDYDASLVYHKFWRVDDDSDIGTSGINAALQPGEKDIGQELDLVVTKYFKQGLLPASMSQYVDEPSALIRFRGGLFKPGDAYGPGTDSTMHRAFVDFIWRF |
| 3SY7 Chain:A ((17-414)) | ---------------------------------------SSLDLLLRNYYFNRD----------DRVDWTQGFLTTYESGFTQGTVGFGVDAFGYLGLKLDGT----------------------DDYSRAGGA-VKVRI----SKTMLKWGEMQPTAPVFAAGGSRLFPQTATGVQLQSSEFEGLDLEAGHFTE---------ELYATYAGETAKSAD--FIGGRYAITDNLSASLYGAELEDI--------------------YRQYYLNSNYTIP-LASDQSLGFDFNIYRTNDEGKAK-------------AGDISNTTWSLAAAYTL---DAHTFTLAYQKVHGDQPFD---------YIGFG----G-AGGDSIFLANSVQYSDFNGPGEKSWQARYDLNLASYGVPGLTFMVRYINGKDIDGTKMSDNNVGYKNYGYGEDGKHHETNLEAKYVVQSGPA----------KDLSFRIRQAWHRANADQ-GEGDQNEFRLIVD----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3SY7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 69479 for 2552 contacts (27.2/contact) +
2D Compatibility (PS) -34278 + (NN) -2516 + (LL) 5320
1D Compatibility (HY) -800 + (ID) 1750
Total energy: 35455.0 ( 13.89 by residue)
QMean score : -0.055
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