Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNILVRPSQTPKGQCWQVCLDQQAVNFRSESEARRFVDRLEARLRAPHVLPELKQRTA
2K6R Chain:A ((1-29))
---------------GQQYTAIKGRTFRNEKELRDFIEKFGR----------------
General information:
TITO was launched using:
RESULT:
Template:
2K6R.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -2964 for 112 contacts (-26.5/contact) +
2D Compatibility (PS) -2642 + (NN) 698 + (LL) 2144
1D Compatibility (HY) -400 + (ID) 350
Total energy: -3514.0 ( -31.38 by residue)
QMean score : 0.596
(partial model without unconserved sides chains):
PDB file :
Tito_2K6R.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2K6R-query.scw
PDB file :
Tito_Scwrl_2K6R.pdb
: