Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MMKKLLLVATLMAGAAQATAAEKLYLFNWNDYIAEDTLKRFEQQCGCELVQEFYSGTEEMMAKLAAGASGYDVIIPTQNAVEALIRKGDLLELDKSRLANLSNEAAGYLD-K--DFDKGNRYSLPYAFTTTLVGYNKTELDK-LG-IDPADWSVIFD--PAVLEKIKGR-VTVMDDPQELFGAALKYLGHSANDTDPQHWKEAQALILAAKPYWAAFNSSSYIKELTLGNIWVAHGYSSDMYQARADAEAA-GRAFKVDFALPRQGAVLAIDNMVIHKGSKNPDLAYRFIDFMLDGRNASELTNQIGTGTPNAAALPFIKPEIKTLAALFPDATTQARLEPLKDLNSRQRRALNKLWTEIKLR |
| 3TTN Chain:A ((6-340)) | ----------------------SLHIYNWTDYIAPTTLKDFTKESGIDVSYDVFDSNETLEGKLVSGHSGYDIVVPSNNFLGKQIQAGAFQKLDKSKLPNWKNLDPALLKQLEVSDP-GNQYAVPYLWGTNGIGYNVAKVKEVLGDQPIDSWAILFEPENM--KKLAKCGVAFMDSGDEMLPAALNYLGLDPNTHDPKDYKKAEEVLTKVRPYVSYFHSSKYISDLANGNICVAFGYSGDVFQAA-ARAEEAGKGIDIQYVIPKEGANLWFDLMAIPADAKAADNAYAFIDYLLRPEVIAKVSDYVGYANAIPGARPLMDKSVSDSEEVYPPQAVLDKLYVSAVLPAKVLRLQTRTWTRIK-- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3TTN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -122504 for 2832 contacts (-43.3/contact) +
2D Compatibility (PS) -35895 + (NN) -17123 + (LL) 3664
1D Compatibility (HY) -27200 + (ID) 5350
Total energy: -204408.0 ( -72.18 by residue)
QMean score : 0.518
|
|
|